Tulerpeton restoration

A reconstruction
puts the in situ bones back into their in vivo places.

A restoration
imagines the bones and soft tissues that are missing from the data. Adding scaled elements from a sister taxon is usually the best way to handle a restoration as we await further data from the field.

Figure 1. Tulerpeton restored based on the bauplan of Silvanerpeton and to the same scale.

Figure 1. Tulerpeton restored based on the bauplan of Silvanerpeton and to the same scale.

We looked at
Tulerpeton, the Upper Devonian taxon known chiefly from its limbs, earlier. I reconstructed the limbs several ways, but did not attempt a restoration. Here (Fig. 1) that oversight is remedied based on the bauplan of Viséan sister, Silvanerpeton, also nesting at or near the base of the Reptilia (only amnion-layered eggs determine reptile status).

Among the overlapping elements,
in Tulerpeton the pectoral girdle and forelimbs are larger. An extra digit is present laterally.

References
Clack JA 1994. Silvanerpeton miripedes, a new anthracosauroid from the Visean of East Kirkton, West Lothian, Scotland. Transactions of the Royal Society of Edinburgh: Earth Sciences 84 (for 1993), 369–76.
Coates MI and Ruta M 2001
 2002. Fins to limbs: What the fossils say. Evolution & Development 4(5): 390–401.
Lebedev OA 1984. The first find of a Devonian tetrapod in USSR. Doklady Akad. Navk. SSSR. 278: 1407–1413.
Lebedev OA and Clack JA 1993. Upper Devonian tetrapods from Andreyeva, Tula Region, Russia. Paleontology36: 721-734.
Lebedev OA and Coates MI 1995. postcranial skeleton of the Devonian tetrapod Tulerpeton curtum Lebedev. Zoological Journal of the Linnean Society. 114 (3): 307–348.
Mondéjar-Fernandez J, Clément G and Sanchez S 2014. New insights into the scales of the Devonian tetrapods Tulerpeton curtum Lebedeve, 1984. Journal of Vertebrate Paleontology 34:1454-1459.

wiki/Silvanerpeton
wiki/Tulerpeton

Advertisements

A late (Middle Triassic) survivor of a Viséan radiation: Bystrowiella

Most of the taxa
in the large reptile tree (LRT, 1023 taxa) are bunches of leaves on bushy branches, chronicling the slow but steady march of evolution and radiation. In a few cases, like SphenodonDidelphis and Monodelphis, body parts are relatively unchanged over tens to hundreds of millions of years. That seems to be the case once again with Bystrowiella schumanni (Fig. 1), a taxon that nests with Viséan (340 mya) radiation taxa, but appears 130 million years later in the Middle Triassic (208 mya), In other words, this taxon had a long ghost-lineage.

Figure 1. Bystrowiella materials. Noteworthy are the lack of antorbtial fenestra, lack of an intertemporal, great size of the femur relative to the humerus and pectoral girdle and the possibility that disassociated armor might have belonged to this taxon, convergent with chroniosuchians.

Figure 1. Bystrowiella materials. Noteworthy are the lack of antorbtial fenestra, lack of an intertemporal, great size of the femur relative to the humerus and pectoral girdle and the possibility that disassociated armor might have belonged to this taxon, convergent with chroniosuchians (inset). Scale bars indicate a larger humerus than was drawn with the scapula graphic.

Bystrowiella schumanni (Fig. 1, Middle Triassic) was considered a bystrowianid chroniosuchid by Witzmann and Schoch 2017 despite lacking the hallmark antorbital fenestra found on traditional chroniosuchids and having the medial premaxillary teeth larger than the lateral ones, along with a long list of other distinct traits. They reported, “In sum, the postcranial skeleton of Bystrowiella is much more amniote-like than that of chroniosuchids, and one might expect this morphology in a rather terrestrial animal.”
Chroniosuchids are otherwise known from the Early Permian to Late Triassic.

By contrast
the large reptile tree (LRT, 1023 taxa) nest chroniosuchids near the base of the new Archosauromorpha branch of the Reptilia (= Amniota), not as a basal  And it nests Bystrowiella as a late surviving member of the Viséan radiation that gave us reptiles, derived from basal Seymouriamorpha close to the origin of the Leponspondyli, but distinct from the lineage. They reported, “The most conspicuous character that is shared by chroniosuchians, Gephyrostegus and higher stem amniotes is the T-shaped interclavicle, and this character distinguishes chroniosuchians from embolomeres.”

Not sure about those osteoderms
They were found separate from the skull, but match back of the skull depressions. If they do belong to Bystrowiella, then they evolved by convergence with chroniosuchids over 130 million years.

Both analyses
nest Bystrowiella near Silvanerpeton, a stem or basal amniote from the Viséan. The Witzmann and Schoch tree nests other chroniosuchids there, too, though probably due to taxon exclusion.

Outgroups in the LRT include
the basal seymouriamorph Kotlassia and the basal seymouriamorph leposponyl, Utegenia. Despite its late appearance in the fossil record, phylogenetically that puts Bystrowiella at the very base of the clade that includes all reptiles (= amniotes), which makes it a VERY interesting taxon.

References
Witzmann F and Schoch RR 2017. Skull and postcranium of the bystrowianid Bystrowiella schumanni from the Middle Triassic of Germany, and the position of chroniosuchians within Tetrapoda. Journal of Systematic Palaeontology 29 pp.

http://dx.doi.org/10.1080/14772019.2017.1336579

 

Diplovertebron and amphibian finger loss patterns

Updated June 13, 2017 with the fact that Diplovertebron is the same specimen I earlier illustrated as Gephyrostegus watsoni. And the Watson 1926 version of Diplovertebron (Fig. 1) was so inaccurately drawn (by freehand) that the data nested is apart from the DGS tracing. Hence this post had deadly errors now deleted.

Figure 2. The gradual loss of basal tetrapod fingers. Unfortunately fingers are not known for every included taxon.

Figure 2. The gradual loss of basal tetrapod fingers. Unfortunately fingers are not known for every included taxon. Odd Tulerpeton with 6 fingers may result from taphonomic layering of the other manus peeking out below the top one. See figure 6. Mentally delete Diplovertebron from this chart. 

The presence of five manual digits
in Balanerpeton (Figs. 4, 5) sheds light on their retention in Acheloma + Cacops. There is a direct phylogenetic path between them (Fig. 2). Note that all other related clades lose a finger or more. Basal and stem reptiles also retain five fingers.

Figure 2. Utegenia nests as a sister to Diplovertebron.

Figure 3. Utegenia nests as a sister to Diplovertebron.

Distinct from the wide frontals
in Utegenia and Kotlassia,  Balanerpeton (Fig. 4) had narrower frontals like those of Silvanerpeton, a stem reptile.

Figure 4. The basal amphibian, Balanerpeton apparently has five fingers (see figure 5).

Figure 4. The basal amphibian, Balanerpeton apparently has five fingers (see figure 5).

As reported
earlier, finger five was lost in amphibians,while finger one was lost in temonospondyls. Now, based on the longest metacarpal in Caerorhachis and Amphibamus (second from medial), apparently manual digit one was lost in that clade also, distinct from the separate frog and microsaur clades. In summary, loss from five digits down to four was several times convergent in basal tetrapods.

Figure 5. DGS recovers five fingers in Balanerpeton with a Diplovertebron-like phalangeal pattern.

Figure 5. DGS recovers five fingers in Balanerpeton with a Diplovertebron-like phalangeal pattern. Two 5-second frames are shown here.

Finally, we have to talk about
Tulerpeton (Fig. 6). The evidence shows that the sixth manual digit is either a new structure – OR – all post-Devonian taxa lose the sixth digit by convergence, since they all had five fingers. Finger 6 has distinct phalangeal proportions, so it is NOT an exposed finger coincident rom the other otherwise unexposed hand in the fossil matrix.

Figure 2. Tulerpeton manus and pes in situ, reconstructed by Lebdev and Coates 1995 and newly reconstructed here.

Figure 6. Tulerpeton manus and pes in situ, reconstructed by Lebdev and Coates 1995 and newly reconstructed here. Digit 6 is either a new structure, or a vestige that disappears in all post-Devonian taxa.

References
Fritsch A 1879. Fauna der Gaskohle und der Kalksteine der Permformation “B¨ ohmens. Band 1, Heft 1. Selbstverlag, Prague: 1–92.
Kuznetzov VV and Ivakhnenko MF 1981. Discosauriscids from the Upper Paleozoic in Southern Kazakhstan. Paleontological Journal 1981:101-108.
Watson DMS 1926. VI. Croonian lecture. The evolution and origin of the Amphibia. Proceedings of the Zoological Society, London 214:189–257.

wiki/Diplovertebron

Tulerpeton becomes the last common ancestor of all Reptilia (=Amniota)

Yesterday we looked at the nesting of Tulerpeton (Lebedev 1984; Latest Devonian; PIN 2921/7) as a basal reptile, rather than a basal tetrapod, which is the traditional nesting.

I thank
Dr. Michael Coates for sending a pdf of his 1995 study of Tulerpeton. From the improved data I was able to make new reconstructions of the manus and pes. The differences shift the nesting of Tulerpeton to the last common ancestor of all reptiles (= amniotes). replacing Gephyrostegus bohemicus, the taxon that held that node in the large reptile tree (LRT) for the last six years.

Figure 1. Tulerpeton parts from Lebedev and Coates 1995 here colorized and newly reconstructed. Manus and pes enlarged in figure 2.

Figure 1. Tulerpeton parts from Lebedev and Coates 1995 here colorized and newly reconstructed. Manus and pes enlarged in figure 2. Note the in situ placement of the pedal phalanges. The clavicle is shown as originally published and withe the ventral view reduced in width to compare its unchanged length to the original lateral view image.

In the new reconstruction
only the manus retained 6 digits, with the lateral sixth digit a vestige. The pes has a new reconstruction with only 5 digits, very much in the pattern of Gephyrostegus bohemicus. Both have five phalanges on digit 5. In the new reconstructions all of the PILs (Peters 2000) line up in sets.

Figure 2. Tulerpeton manus and pes in situ, reconstructed by Lebdev and Coates 1995 and newly reconstructed here.

Figure 2. Tulerpeton manus and pes in situ, reconstructed by Lebdev and Coates 1995 and newly reconstructed here with PILs added. Note the broken mt5 and the reinterpretation of the squarish elements as phalanges, not distal carpals. The tibiale is rotated 90º to cap the tibia.

Lebedev and Coates report:
“A cladistic analysis indicates that Tulerpeton is a reptilomoprh stem-group amniote and the earliest known crown-group tetrapod. The divergence of reptilomorphs from batrachomorphs (frogs and kin) occurred before the Devonian Carboniferous boundary. Polydactyly persisted after the evolutionary divergence of the principal lineages of living tetrapods. Tulerpeton was primarily air-breathing.” They did not test Silvanerpeton, Gephyrostegus, Eldeceeon or Urumqia, which all now nest as proximal kin to Tulerpeton.

Autapomorphies
Manual digit 6 is present as a vestigeAn anocheithrum (small bone atop the cleithrum) is present. Metatarsal 1 in Tulerpeton is the largest in the set. The posterior ilium rises. The femur has a large, sharp, fourth (posterior) trochanter.

Scales
on Tulerpeton are also found similar in size and number are also found in related taxa.

Taxon exclusion
and digital graphic segregation AND reconstruction AND comparative anatomy all contributed to the new data scores. As usual, I have not seen the specimen, but I did add it to a large gamut data matrix, the likes of which are not typically employed.

Figure 1. Silvanerpeton and Gephyrostegus to the same scale. Each of the two frames takes five seconds. Novel traits are listed. This transition occurred in the early Viséan, over 340 mya. Gephyrostgeus is more robust and athletic with a larger capacity to carry and lay eggs.

Figure 3. Silvanerpeton and Gephyrostegus to the same scale. Each of the two frames takes five seconds. Novel traits are listed. These two give some idea about the size and shape of Tulerpeton.

References
Coates MI and Ruta M 2001 (2002). Fins to limbs: What the fossils say. Evolution & Development 4(5): 390–401.
Lebedev OA 1984. The first find of a Devonian tetrapod in USSR. Doklady Akad. Navk. SSSR. 278: 1407–1413.
Lebedev OA and Clack JA 1993. Upper Devonian tetrapods from Andreyeva, Tula Region, Russia. Paleontology36: 721-734.
Lebedev OA and Coates MI 1995. postcranial skeleton of the Devonian tetrapod Tulerpeton curtum Lebedev. Zoological Journal of the Linnean Society. 114 (3): 307–348.
Peters D 2000. Description and Interpretation of Interphalangeal Lines in Tetrapods. Ichnos, 7: 11-41

wiki/Tulerpeton

Tulerpeton: a Devonian reptile!

This post was updated February 24, 2017, after new data on Tulerepton became available. 

This latest nesting 
of the former basal tetrapod, Tulerpeton (Fig. 2), as a Devonian reptile in the large reptile tree (957 taxa) was both anticipated (Fig. 1) and welcome.

As you may recall…
Middle Devonian tetrapod trackways (preceding and coeval with the basal bony fish Cheirolepis and the lobe fins Eusthenopteron and Osteolepis) seemed anachronistic when first announced. But it’s all coming together now. And this new nesting adds precious time for evolution to produce the variety of amphibian-like reptiles present in the Viséan, still awaiting consensus confirmation of their reptilian status.

Figure 1. The nesting of Tulerpeton in the Latest Devonian, at the base of the Lepidosauromorpha.

Figure 1. The nesting of Tulerpeton in the Latest Devonian, at the base of the Lepidosauromorpha. This taxon was added to this graphic that was published online in August 2016.

According to Wikipedia
Tulerpeton curtum
(Lebedev 1984, Fammenian, Latest Devonian, 365 mya; Fig. 1) is “one of the first true tetrapods to have arisen.” It was distinct from less derived Acanthostega and Ichthyostega by a strengthened limb structure. It was also half to an eighth the size of these basal tetrapods. A fragmented skull is known for Tulerpeton, but the only fragment I’ve seen is a vague round premaxilla on small reconstructions. Both the manus and pes have 6 digits, all provided with clawed unguals. (NOTE ADDED MARCH 6, 2017: The pes has only five digits after a fresh reconstruction)

FIgure 1. Tulerpeton compared to Eldeceeon.

FIgure 2. Tulerpeton compared to similarly-sized Eldeceeon. The loss of one digit in the manus and pes occurred between the Fammenian and Viséan.

Tulerpeton lived in shallow marine waters.
Little is known of this Eldeceeon-sized specimen, but the limbs and pectoral girdle are fairly well preserved. And these were enough to nest it with Eldeceeon (Fig. 1) out of 956 other candidate taxa in the LRT.

Coates and Ruta 2001 report:
“The most taxon-inclusive crown hypothesis incorporates the hexadactylous Late Devonian genus Tulerpeton as a basal stem amniote, thereby pegging the lissamphibian amniote divergence to a minimum date of around 360 Ma.” So there were early rumors. Only taxon exclusion prevented prior workers from recovering the reptile relationship earlier, no doubt due to the six fingers and toes on this putative basal tetrapod.

The loss of the sixth digit
occurred more than once, just as the later loss of a fifth digit occurred more than once. We should look for taxa with six fingers at the base of the Reptilomorpha and Seymouriamorpha — unless Tulerpeton developed a sixth finger on its own.

Phylogenetic analysis
originally placed Tulerpeton near the base of reptilomorphs, like Proterogyrinus and Eoherpeton. Later workers nested it as a more basal member of the Tetrapoda, between Acanthostega and Greererpeton.

Here
those long, clawed fingers and toes, and the individual proportions of the metapodials and phalanges nested Tulerpeton with Eldeceeon (Fig. 1) at the base of the Lepidosauromorpha, very near the base of the Reptilia. This clade is derived from a sister to the basalmost reptile, the late-surviving (Westphalian) Gephyrostegus bohemicus.

This new nesting of Tulerpeton pushes the origin of the Reptilia
from the Early Carboniferous back to the Late Devonian. Unfortunately, traditional phylogenetic analyses have not yet recognized the amphibian-like reptiles that were (by way of phylogenetic bracketing) laying amniotic eggs, the hallmark of the Reptilia.

Major studies do not yet recognize the reptile status
of Gephyrostegus and Tulerpeton. Hopefully someone will add them and Eldeceeon to a future taxon list to confirm or refute the present findings.

References
Coates MI and Ruta M 2001 (2002). Fins to limbs: What the fossils say. Evolution & Development 4(5): 390–401.
Lebedev OA 1984. The first find of a Devonian tetrapod in USSR. Doklady Akad. Navk. SSSR. 278: 1407–1413.
Lebedev OA and Clack JA 1993. Upper Devonian tetrapods from Andreyeva, Tula Region, Russia. Paleontology36: 721-734.
Lebedev OA and Coates MI 1995. postcranial skeleton of the Devonian tetrapod Tulerpeton curtum Lebedev. Zoological Journal of the Linnean Society. 114 (3): 307–348.

wiki/Tulerpeton

Marjanovic and Laurin 2016: Basal tetrapods, continued…

rhynSorry this took so long…
As you’ll see there was a lot of work and prep involved that has been several weeks in the making. Thank you for your patience.

Earlier I introduced the Marjanovic and Laurin 2016 study
the way they did, by reporting their confirmation of the Ruta and Coats 2007 basal tetrapod topology that they were testing prior to reevaluating the data. I noted then that both studies (Fig. 5) included many so-called pre-reptiles, including  Bruktererpeton, Chroniosaurus, Solenodonsaurus, Limnoscelis, Tseajaia, DiadectesOrobates and Westlothiana,should not be in the pre-amniote inclusion set. Those taxa nest within the Reptilia in the large reptile tree (LRT, subset Fig. 4) with Silvanerpeton and Gephyrostegus at the base of the Reptilia (= Amniota). As reported earlier, those two are the amphibian-like reptiles that first developed the amniotic egg that defines the clade Amniota, a junior synonym of the Reptilia, based on the tree that recovers them at the base of both major branches, the new Archosauromorpha and the new Lepidosauromorpha early in the Viséan.

How can one readily compare two competing cladograms? 
You would not want to sit through a comparison of tens of thousands of scores for competing trees in a short blog like this. But we can compare images of taxa (Figs. 1–3. 6–8) placed in their phylogenetic order, subdivided for clarity into the three major lineages of basal tetrapods:

  1. Basalmost tetrapods and the lineage that led to Reptilia
  2. Members of the Lepospondyli
  3. Members of the Microsauria

These images will serve as a ready reference for today’s topics. As a preview, in summary:

The Marjanovic and Laurin (ML) 2016 tree nests

  1. frogs like Rana and salamanders like Andrias with microsaurs.
  2. small amphibamids, Cacops and Micromelerpeton nest with temnospondyls.
  3. basal Amniota splits into Synapsida (Caseasauria + Archaeovenator) and Sauropsida (Captorhinus, Paleothyris, Petrolacaosaurus) arising from an unknown genus basal to Diadectomorpha + Amniota
  4. The clade Amphibia arises near Solenodonsaurus + the crown-group Tetrapoda
  5. The clade Microsauria is divided into three parts separated by non-microsaurs with origins near Westlothiana.

The LRT nests

  1. frogs and salamanders nest with lepospondyls.
  2. small amphibamids, Cacops and Micromelerpeton nest with lepospondyls.
  3. basal Amniota splits into Archosauromorpha  (several basal taxa, Archaeovenator, Paleothyris and Petrolacaosaurus) and Lepiodosauromorpha (several basal taxa, Caseasauria and Captorhinus) with both major clades arising from Gephyrostegus bohemicus a late-surving Westphalian taxon, and Silvanerpeton, a Viséan taxon.
  4. The clade Amphibia arises near Balanerpeton and the amphibamids.
  5. The clade Microsauria has a single origin near Kirktonecta 

What you should be looking for
is a gradual accumulation of traits in every lineage. And look for taxa that don’t fit in the order presented. This can be done visually with these figures, combining hundreds of traits into one small package. Rest assured that all scoring by ML and the competing analysis in the LRT were done with the utmost care and diligence. So, some biased or errant scoring must have taken place in one study or the other or both for the topologies to differ so great. Bear in mind that ML had firsthand access to fossils and may have bowed to academic tradition, while I had photos and figures to work with and no allegiance to academic tradition.

First
the large reptile tree (LRT) taxa (Figs. 1–3) had two separate origins for limbed vertebrates.

Figure 1. CLICK TO ENLARGE. Basal tetrapod subset according to the LRT. These taxa lead to Reptilia, Lepospondyli and through that clade, the Microsauria. Note the convergent development of limbs and digits arising out of Osteolepis.

Figure 1. CLICK TO ENLARGE. Basal tetrapod subset according to the LRT. These taxa lead to Reptilia, Lepospondyli and through that clade, the Microsauria. Note the convergent development of limbs and digits arising out of Osteolepis.

In both studies
basal tetrapod outgroups are tail-propelled sarcopterygians having muscular fins not yet evolved into limbs with digits. Behind the skull are opercular bones that are lost in taxa with limbs. An exoskeleton of bony scales disappears in taxa with limbs. Snout to tail tip length averages 50 cm.

In the LRT
locomotion switches to the limbs in temnospondyls, which tend to be larger (1m+ and have overlapping dorsal ribs. The Greererpeton branch flattens out the ribs and skull, reducing both the tail and the limbs to likely become sit-and-wait predators. Phylogenetic size reduction and limb elongation is the trend that leads to Reptilia (Gephyrostegus). However an early exception, Crassigyrinus (Fig. 1), elongates the torso and reduces the limbs to adopt an eel-like lifestyle. Kotlassia adopts a salamander-like lifestyle from which Utegenia and the Lepospondyli arise (Fig. 2) alongside Reptilia.

Figure 2. CLICK TO ENLARGE. Subset of the LRT representing lepospondyli leading to frogs.

Figure 2. CLICK TO ENLARGE. Subset of the LRT representing lepospondyli leading to frogs.

In the LRT,
short-tailed, salamander-like Utegenia (derived from the Seymouriamorpha, Fig. 2) is a late-surving basal member of the generally small-sized clade Lepospondyli, which ultimately produces salamanders and frogs. A side branch produces the larger, temnospondyl-like Cacops, which develops a bony ridge atop the dorsal spines. Note the nesting here of Gerobatrachus as a salamander and frog relative, distinct from the ML tree (Fig. 6).

Figure 3. CLICK TO ENLARGE. Subset of the LRT focusing on Microsauria.

Figure 3. CLICK TO ENLARGE. Subset of the LRT focusing on Microsauria.

In the LRT
the Microsauria are derived here from the small basal amphibamids, Caerorhachis and more proximally, Kirktonecta. Microsaurs range from salamander-like to lizard-like to worm-like. The tail elongates to become the organ of locomotion in the Ptyonius clade. The head and torso flatten in the Eoserpeton clade.

Below
is the pertinent subset of the LRT (Fig. 4) with a representative, but not complete or exhaustive set of taxa. A summary of the tree’s differences with the ML tree is presented above. The ML tree is summarized below in three parts (6-8).

Figure 4. Subset of the LRT focusing on basal tetrapods.

Figure 4. Subset of the LRT focusing on basal tetrapods.

The Marjanovic and Laurin 2016 tree
(Fig. 5) presents a topology that is similar to the LRT in parts, but distinct in other parts, as summarized above. I realize this presentation is illegible at this column size due to the large number of taxa. Click on it to enlarge it. At the top and down the right column are basal taxa leading to temnspondyls and reptiles at bottom right. Working from the bottom up the left side are the microsaurs ending with the lissamphibians (frogs and salamanders) at the top/middle of the left column.

Figure 4. CLICK TO ENLARGE. The reevaluated Marjanovic and Laurin tree from which taxa on hand were set to match the tree topology (Figs. 5-7).

Figure 5. CLICK TO ENLARGE. The reevaluated Marjanovic and Laurin tree from which taxa on hand were set to match the tree topology (Figs. 5-7).

The ML tree
subdivides into there parts (Figs 6-8): basal taxa, some leading to temnospondyls and amphibamids; taxa leading to and including Amniota; and finally microsaurs leading to and including extant amphibians.

Figure 5. Basal tetrapods according to Marjanovic and Laurin 2016. Figures 6 and 7 lead to Amniota and Microsauria respectively.

Figure 6. Basal tetrapods according to Marjanovic and Laurin 2016. Figures 6 and 7 lead to Amniota and Microsauria respectively.

In the ML topology,
Ichthyostega, a taxon with a very large pectoral girdle, ribs, and pelvis, gives rise the the altogether smaller and more fish-like Acanthostega, which gives rise to members of the Whatcheeridae, tall-skulled Crassigyrinus and flat-skulled Osinodus. The traditional Colosteidae arise next. They have a variety of long shapes with short-legs. Oddly from this seemingly primitive clade arises small, short-torsoed, long-legged Eucritta followed by long torsoed, short-legged Proterogyrinus followed by a large clade of short-torsoed, long-legged taxa, including the >1m temnospondyls and the <30cm amphibamids.

Figure 7. CLICK TO ENLARGE. These are taxa listed on the Marjanovic and Laurin 2016 that lead to Reptilia (Amniota).

Figure 7. CLICK TO ENLARGE. These are taxa listed on the Marjanovic and Laurin 2016 that lead to Reptilia (Amniota).

In the ML tree
Gephyrostegus arises from the small temnospondyl, Balanerpeton, and and gives rise to Chroniosaurus, Solenodonsaurus, the Seymouriamorpha (including Utegenia) and the Diadectomorpha, nesting as the sister clade to the Amniota. Thus, no phylogenetic miniaturization was present at the origin of the Amniota in the ML tree. Moreover, dozens of taxa were not included here that nest at the base of the Amniota (Reptilia) in the LRT.  Basal amniotes in the ML tree are all Latest Carboniferous to Early Permian, while in the LRT basal amniotes arrived at least 40 million years earlier in the Visean (Early Carboniferous) and had radiated widely by the Late Carboniferous, as shown by the ML taxaon list. No amphibian-like reptiles made it to their Amniota.

FIgure 7. Microsauria according to Marjanovic and Laurin 2016. Here frogs and caecilians nest within the Microsauria.

FIgure 8. CLICK TO ENLARGE. Microsauria according to Marjanovic and Laurin 2016. Here frogs and caecilians nest within the Microsauria.

In the ML tree
the three microsaur clades (Fig. 5) arise from the Viséan taxon, Westlothiana (Fig. 8), which nests as a derived reptile when tested against more amniotes in the LRT. Utaherpeton is a basal microsaur in both trees, but it gives rise to the eel-like Acherontiscus and kin in the ML tree. Westlothiana further gives rise to Scincosaurus and kin, including the larger Diplocaulus. Thirdly, Westlothiana gives rise to lizard-like Tuditanus which gives rise to big-skulled Pantylus and tiny-limbed Microbrachis, shark-nosed Micraroter and Rhynchonkos. In both trees, Batropetes bucks the long-body, short-leg trend. In both trees Celtedens, representing the salamander-like albanerpetontids, gives rise to extant salamanders and frogs

So the possibilities are:

  1. Only one tree is completely correct
  2. Only one tree is mostly correct.
  3. Both trees have some correct and incorrect relationships

Problems

  1. Basal tetrapods tend to converge on several traits. For instance in the LRT, the palate is ‘open’ with narrow pterygoids in both temnospondyls and lepospondyls.
  2. Many small derived taxa lose and fuse skull bones
  3. Many taxa fuse vertebral bones as they evolve away from the notochord-based semi-encircling vertebrae of fish toward more complete vertebrae in which the neural spine, pleurocentrum and intercentrum tend to fuse, sometimes in convergent pattern, as widely recognized in basal reptiles and microsaurs.
  4. In basal tetrapods, fingers are not often preserved. So when four fingers appear their identity has to be ascertained. In the LRT mc5 and digit 5 are absent in Lepospondyls. In the LRT mc1 and digit 1 are absent in the temnospondyls. Five fingers and/or metacarpals are preserved in the few other non-amniote, basal tetrapods that preserve fingers (Proterogyrinus, Seymouria). The ML tree assumes that when four digits are present, they represent digits 1–4.

Ultimately
maximum parsimony and Occam’s Razor should rule unless strong evidence to the contrary is provided. After evidence is presented, it’s up to colleagues to accept or reject or ignore hypotheses.

References
Marjanovic D and Laurin M 2016. Reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates. PeerJ. Not peer-reviewed. 356 pp.
Ruta M and Coates MI 2007
. Dates, nodes and character conflict: addressing the lissamphibian origin problem. Journal of Systematic Palaeontology 5-69-122.

Continuing problems in vertebrate paleontology – part 1

A quick glance through various paleontology topics
on various Wikipedia pages reveals a rather long list of antiquated views that remain as false paradigms. These were falsified by testing in the large reptile tree. We’ll just bring up a few of these at a time while waiting for more interesting paleo-news to break.

  1. The first amniotes, referred to as “basal amniotes”, resembled small lizards and evolved from the amphibian reptiliomorphs about 312 million years ago. Move that back to 340 mya for phylogenetically widespread fossil evidence of basal amniotes and to 360 mya for their hypothetical origins.
  2. The first dichotomy within the Amniotes produced the clades Synapsida and Sauropsida. In the LRT several amniote clades precede the advent of the Synapsida. The last common ancestors of all amniotes are Silvanerpeton and Gephyrostegus bohemicus. The first dichotomy produced the new Lepidosauromorpha and the new Archosauromorpha. Synapsids nest deeply within the new Archosauromorpha.
  3. Diadectomorpha is a clade of large reptile-like amphibians. The LRT nests all diadectomorphs deep within the new Lepidosauromorpha. 
Figure 1. A new reconstruction of Gephyrostegus bohemicus. This species lived 30 million years after the origin of the Amniota in the Visean, 340 mya. Note the lack of posterior dorsal ribs. This trait shared by all basalmost amniotes, may provide additional space for massive eggs in gravid females, but is also shared with males, if there were males back then.

Figure 1. A new reconstruction of Gephyrostegus bohemicus, a late-surviving basalmost amniote. This species lived 30 million years after the other amniotes in the Visean, 340 mya. Note the lack of posterior dorsal ribs. This trait shared by all basalmost amniotes, may provide additional space for massive eggs in gravid females, but is known in all specimens.

And while we’re at it…
This comes courtesy of Ben Creisler at the DML TheSociety of Vertebrate Paleontology 2016 Meeting Program and Abstract Book is available here:

PLEASE NOTE! Content is embargoed until the actual presentation.
“Unless specified otherwise, coverage of abstracts presented orally at the Annual Meeting is strictly prohibited until the start time of the presentation, and coverage of poster presentations is prohibited until the relevant poster session opens for viewing.”
There is one abstract in there
that confirms something I discovered four years ago, which brings some satisfaction that it was discovered again.